Bio-atomic force microscope Facility
Bio-atomic force microscope Facility
Make
Oxford Instruments Asylum Research
Model
USA. MFP-3D BIO
Facility Status
Working
Date of Installation
Facility Management Division
Institute Central Research Facilities (ICRF)

Category

  • Biocharacterization » Cytometery

Booking Details

Booking available for
Internal and External Both

Facility Management Team and Location

Faculty In Charge
Prof. Shamik Sen shamiks@iitb.ac.in +(91-22) 2576 7743
Facility Operator
Vijay Krushna Mistari mistarivijay@iitb.ac.in Ext. No.- 022-2159-6746
Co-convenors
Prof. Shamik Sen (BSBE) Prof. Samir K. Maji (BSBE) Prof. Kiran Kondabagil (BSBE) Prof. Arindam Chowdhury (Chemistry) Prof. Mitun Chowdhury (MEMS)
Department
Biosciences and Bioengineering
LAB Email ID
bioafm@iitb.ac.in, bioafm001@gmail.com
Facility Location
Room No.-03, Central Instrumentation Room, Ground Floor, Bio-Sciences & Bio-Engineering Department, I.I.T. Bombay, Powai, Mumbai - 400076
Lab Phone No
Ext. No. 022-2159-6746

Facility Features, Working Principle and Specifications

Features Working Principle

The Bio-AFM facility was installed in January 2014, in the department of “Bio-Science & Bio-Engineering” Central Facility as per RIFC norms. The Facility is open for all IIT Bombay internal users, other institutes, National Laboratory, and Industry.
The principle of operation of the AFM is very simple - A sharp cantilever tip interacts with the sample surface sensing the local forces between the molecules of the tip and sample surface. This instrument is not a “conventional microscope” that collects and focuses light. The word microscope has been associated with this instrument because it is able to measure microscopic features of the sample. The most characteristic property of the AFM is that the images are acquired by “feeling” the sample surface without using light. In this way, not only the sample topography can be recorded with good resolution, but also the material characteristics and the strength of interaction between the sample surface and the cantilever tip. Due to the fact that no light is involved in acquiring the sample properties, the AFM reaches a resolution far below the diffraction limit offered by the optical microscopy. Its resolution is limited only by the tip radius and the spring constant of the cantilever.

Features

  • High-Resolution imaging in liquid for soft biological samples.
  • No pre-processing of materials/cells is required for imaging.
  • Ability to combine AFM measurements with images obtained in an inverted microscope.
  • Real-time Optical Navigation: Top or bottom-view optical images can be used to navigate the tip to any feature on the sample and then scan that area at the nanoscale with the AFM or select specific locations for force curves - easily and seamlessly.
  • Powerful Real-time and Offline Rendering Options: Both AFM and optical images can be rendered and viewed together in both real-time and offline. Optical images can be overlaid on AFM data to assist interpretation. Stunning 3D renderings combine AFM topography with the capabilities of light microscopy.

Supported Optical Techniques

  • Bright-field
  • Phase Contrast
  • Fluorescence
  • Large Z range (40 μm extended Z) accommodates demanding applications such as cell-cell and cell-substrate adhesion measurements.
  • Users can choose between open loop force curves with sensored Z for the ultimate in low noise performance or closed loop Z for the most accurate velocity control.
  • Force Mapping measures force-distance curves at a grid of points with automated fitting of indentation models for estimation of elastic modulus and automated adhesion/rupture force analysis.
  • Analysis software helps by suggesting the most appropriate indentation model among many built-in options, including "Hertz / Sneddon, Johnson-Kendall-Roberts (JKR), Derjaguin-Muller-Toporov (DMT), and Oliver-Pharr", or students may also freely enter their customized models.
Body Specification

System Specification
Closed loop sensors on all three axes:

  • X & Y range 90 μm, X & Y sensors <0.5 nm noise, <0.5% non-linearity
  • Z range >15 μm, Z sensor <0.25 nm noise
  • Optional Extended Z Head with range >40 μm
  • DC height noise <50 pm

Lowest Noise Single Molecule or Cellular Force Measurements:

  • Cantilever deflection noise <15 pm (typical 8 pm)
  • Low coherence source Super luminescent diode (SLD) for ripple-free baseline
  • Cantilever spring constant calibration by the thermal noise and Sader methods or GetReal automated cantilever calibration

Flexible Interface:

  • Allows recording or triggering from any channel during a force curve, including amplitude/phase from AC or Dual ACTM mode
  • User-supplied input voltages
  • Photon count rate (with optional Digital Access Module)

Force Mapping:

  • Including automated adhesion and elastic modulus analysis

Instructions for Registration, Sample Preparation, User Instructions, Precautionary Measures and Charges

Instructions for Registration

Only online registration through the IRCC webpage will be accepted. If the appointment is given but the user cannot come, a mail should be immediately sent to bioafm@iitb.ac.in to cancel his/her slot.
USB drives are not allowed to copy data to minimize virus-related issues. Instead, data must be copied into a new blank CD or sent online

Instruction for Sample Preparation

Instructions for Sample Preparation/Submission

Samples must be prepared either on mica, on glass coverslips, or in petri dishes of size 60 mm.

User Instructions and Precautionary Measures

We shall accept online registration only through the IRCC webpage. If you need to cancel your slot, send an email immediately to with an explanation.

Slots will be provided on a first-come-first-served basis.

USB drives are strictly prohibited for copying data to minimize virus-related issues. You are requested to bring a new blank CD to transfer your data. All data must be transferred within 7 days of imaging. Without exception.

Users must be present during the entire slot.

Applications

Fields of Science

  • Biological sciences
  • Life science
  • Physical sciences
  • Material science
  • Polymer science
  • Electrical characterization
  • Nanolithography
  • Nanotechnology
  • Nano-mechanics

Sample Details

SOP, Lab Policies and Other Details

Publications

Publications
Publications